Data Portal Integrations

Minerva

Minerva is a suite of software tools for interpreting and interacting with complex images, organized around a guided analysis approach.

Explore HTAN Minerva stories

CellxGene

CellxGene is an interactive viewer for single-cell expression.

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Explore single cell RNA Seq data in CellxGene

Analysis Pipelines

MCMICRO

MCMICRO is a software pipeline for generating single cell data from multiple tissue imaging technologies.

Integrations Coming Soon

Cancer Digital Slide Archive (CDSA)

CDSA is a containerized web-based platform for the analysis, visualization, management and annotation of whole-slide digital pathology imaging data.

cBioPortal

The cBioPortal for Cancer Genomics is an open-source software platform that enables interactive, exploratory analysis of large-scale cancer genomics data sets with a biologist-friendly interface

Luna Single Cell Viewer

Luna is a tool for publishing single cell data with highlighted observations and findings.